If a master cylinder or piston shows any damage, replace them.

If a cup is worn, damaged softened (rotted), or swollen, the piston assembly should be replaced to renew the cups.
If fluid leakage is noted at the brake lever, the piston assembly should be replaced to renew the cups.
If they are damaged, replace them.
If the springs are damaged, replace them.
If the relief port becomes plugged, the brake pads will drag on the disc. Blow the ports clean with compressed air.
Front Master Cylinder [I] Rear Master Cylinder [J]

Rear Master Cylinder Installation
Brake DiscBattery Installation
Visually inspect the surface of the battery container.
If any signs of cracking or electrolyte leakage from the
sides of the battery.
Put the battery into the rear fender
Install the band [A].
Connect the positive (+) cable [B] (red cap) to the positive
(+) terminal first, and then ...
ECU Power Supply Inspection
Remove the upper air cleaner housing (see Air Cleaner
Element Replacement in the Periodic Maintenance chapter).
Visually inspect the ECU connectors.
If the connector is clogged with mud or dust, blow it off
with compressed air.
Remove the ECU (see ECU Removal).
Visually inspect the ...
Idle Speed Control Valve Actuator Resistance Inspection
Turn the ignition switch to OFF.
Remove the air cleaner housing (see Air Cleaner Housing
Removal in the Fuel System (DFI) chapter).
Disconnect the idle speed control valve actuator connector
[A].
Connect a digital meter to the idle speed control valve
actuator connector [A]
...