If a master cylinder or piston shows any damage, replace them.

If a cup is worn, damaged softened (rotted), or swollen, the piston assembly should be replaced to renew the cups.
If fluid leakage is noted at the brake lever, the piston assembly should be replaced to renew the cups.
If they are damaged, replace them.
If the springs are damaged, replace them.
If the relief port becomes plugged, the brake pads will drag on the disc. Blow the ports clean with compressed air.
Front Master Cylinder [I] Rear Master Cylinder [J]

Rear Master Cylinder Installation
Brake DiscThermostat Removal
Remove:
Fuel Tank (see Fuel Tank Removal in the Fuel System
(DFI) chapter)
Air Cleaner Housing (see Air Cleaner Housing Removal
in the Fuel System (DFI) chapter)
Throttle Body Assy (see Throttle Body Assy Removal in
the Fuel System (DFI) chapter)
Throttle Body Assy Holder Clamp [A]
...
Vehicle-down Sensor Input Voltage Inspection
NOTE
Be sure the battery is fully charged.
Turn the ignition switch to OFF.
Disconnect the vehicle-down sensor connector and connect
the measuring adapter [A] between these connectors
as shown in the figure.
Main Harness [B]
Vehicle-down Sensor [C]
Special Tool - Measuring Adapte ...
Rear Sprocket Warp Inspection
Raise the rear wheel off the ground with the stand so that
it will turn freely.
Set a dial gauge [A] against the rear sprocket [B] near the
teeth as shown in the figure, and rotate [C] the rear wheel
to measure the sprocket runout (warp). The difference
between the highest and lowest di ...